ETHERPATHS Project (The 7th Framework EU Programme)

ETHERPATHS consortium consists of a multidisciplinary team involving ten partners from seven different countries: Finland, Spain, Sweden, United Kingdom, Russia, Italy and Switzerland. Besides the Institute of the Systems Biology SPb there are VTT Technical Research Centre of Finland, Department of Biochemistry and Molecular Biology from the University of Barcelona, University of Gothenburg, University of Cambrige, Department of Clinical and Experimental Medicine Federico II University (Italy), Noray Bioinformatics (Spain), Biomotif AB (Sweden), Advion Biosciences (UK) and Nestlé Research Center (Switzerland) in th consortium. All organizations, which take part in the consortium, gather a considerable expertise in complementary fields: information technology, bioinformatics, metabolic and physiological modeling, systems engineering, biochemistry, microbiology, lipid metabolism, metabolomics, obesity and metabolic syndrome, and clinical nutrition.


The ETHERPATHS proposal is in response to the following topic of the 2nd call for proposals in the EU FP7 Cooperation Work Programme: Food, agriculture and fisheries, and biotechnology: Systems Biology and bioanalytical tools for nutrition research (KBBE-2007-2-2-08). The project has started at the 1st January of 2009 and expected for four years.

Dysregulation of lipid homeostasis is related to multiple major global healthcare problems today, including aging, diabetes and cardiovascular disease. It has already been shown that nutritional modulation of lipid homeostasis via direct supplementation, e.g. n-3 fatty acids, or via indirect mechanisms, e.g. dietary polyphenols, have beneficial effects on human health. There is growing evidence that ether phospholipids such as plasmalogens play a central role in mediating such beneficial effects, but the underlying mechanisms are not understood.

So, the main aim of ETHERPATHS project is a development of systems biology tools that will facilitate studies of dietary interventions aiming to modulate lipid homeostasis.

There are six workgroups in the ETHERPATHS which have been created for realization of the project aims:


In framework of these groups following tasks will be studied:
  • Development of metabolic models that enable studies of gut microbial metabolism
  • Development of dynamic models of systemic lipid metabolism
  • Development of pathway reconstruction methods for studies of tissue-specific effects of dietary interventions.
  • Optimization of the models in context of studies of dietary interventions and will be integrated into a sophisticated software platform.

In silico strategies will be complemented by multiple experimental approaches, including:

  • Dietary interventions involving n-3 fatty acids and polyphenols, combined with tracer studies, in vitro, in vivo, as well as in clinical setting
  • In vitro colon model
  • In vivo germ free and and conventional models of altered lipid metabolism, specifically plasmalogen deficiency.
 

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Institute for Systems Biology SPb

Moscow, Leninskie Gory, 1, build.75G, office. 613, Science park, 119992

+7(495)930-8407,   +7(495)930-8407, +7(495)783-8718

insysbio@insysbio.ru   insysbio@insysbio.ru

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